1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g017380.3.1

Solyc12g017380.3.1


Description : organic cation transporter (OCT)


Gene families : OG0001017 (Archaeplastida) Phylogenetic Tree(s): OG0001017_tree ,
OG_05_0000761 (LandPlants) Phylogenetic Tree(s): OG_05_0000761_tree ,
OG_06_0000885 (SeedPlants) Phylogenetic Tree(s): OG_06_0000885_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017380.3.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 Archaeplastida
AMTR_s00032p00186620 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.04 Archaeplastida
LOC_Os01g22710.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida
LOC_Os07g37510.1 No alias organic cation transporter (OCT) 0.07 Archaeplastida
LOC_Os07g37530.1 No alias organic cation transporter (OCT) 0.03 Archaeplastida
MA_114982g0010 No alias organic cation transporter (OCT) 0.03 Archaeplastida
MA_29857g0020 No alias organic cation transporter (OCT) 0.03 Archaeplastida
MA_72332g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g053860.4.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida
Solyc07g063920.3.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 87 277
No external refs found!