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  5. Solyc12g017510.2.1

Solyc12g017510.2.1


Description : RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana (sp|q8vze7|rap_arath : 640.0)


Gene families : OG0002880 (Archaeplastida) Phylogenetic Tree(s): OG0002880_tree ,
OG_05_0006318 (LandPlants) Phylogenetic Tree(s): OG_05_0006318_tree ,
OG_06_0007227 (SeedPlants) Phylogenetic Tree(s): OG_06_0007227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017510.2.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT2G31890 ATRAP, RAP RAP 0.08 Archaeplastida
GSVIVT01038263001 No alias RAP domain-containing protein, chloroplastic... 0.07 Archaeplastida
Gb_29061 No alias RAP domain-containing protein, chloroplastic... 0.03 Archaeplastida
LOC_Os03g31150.3 No alias RAP domain-containing protein, chloroplastic OS=Oryza... 0.07 Archaeplastida
MA_1130774g0010 No alias RAP domain-containing protein, chloroplastic... 0.04 Archaeplastida
MA_8868156g0010 No alias RAP domain-containing protein, chloroplastic... 0.05 Archaeplastida
Mp2g23920.1 No alias RAP domain-containing protein, chloroplastic... 0.02 Archaeplastida
Mp2g23930.1 No alias RAP domain-containing protein, chloroplastic... 0.02 Archaeplastida
Pp3c3_28000V3.1 No alias RAP 0.1 Archaeplastida
Smo412574 No alias RAP domain-containing protein, chloroplastic... 0.02 Archaeplastida
Smo413123 No alias RAP domain-containing protein, chloroplastic OS=Oryza... 0.03 Archaeplastida
Zm00001e016550_P002 No alias RAP domain-containing protein, chloroplastic OS=Oryza... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013584 RAP 616 671
No external refs found!