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  5. Solyc12g017800.3.1

Solyc12g017800.3.1


Description : Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum (sp|q6l3z4|r1b12_solde : 322.0)


Gene families : OG0002721 (Archaeplastida) Phylogenetic Tree(s): OG0002721_tree ,
OG_05_0001818 (LandPlants) Phylogenetic Tree(s): OG_05_0001818_tree ,
OG_06_0000911 (SeedPlants) Phylogenetic Tree(s): OG_06_0000911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017800.3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Solyc04g007090.1.1 No alias Putative late blight resistance protein homolog R1A-4... 0.04 Archaeplastida
Solyc11g006520.2.1 No alias Putative late blight resistance protein homolog R1B-12... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 152 358
No external refs found!