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  5. Solyc12g020000.3.1

Solyc12g020000.3.1


Description : no hits & (original description: none)


Gene families : OG0007647 (Archaeplastida) Phylogenetic Tree(s): OG0007647_tree ,
OG_05_0006999 (LandPlants) Phylogenetic Tree(s): OG_05_0006999_tree ,
OG_06_0010015 (SeedPlants) Phylogenetic Tree(s): OG_06_0010015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g020000.3.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00155270 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
MA_19843g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_4840V3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR028124 SMAP_dom 394 458
No external refs found!