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  4. Sequence
  5. Solyc12g042930.2.1

Solyc12g042930.2.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0002309 (LandPlants) Phylogenetic Tree(s): OG_05_0002309_tree ,
OG_06_0001279 (SeedPlants) Phylogenetic Tree(s): OG_06_0001279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042930.2.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00264p00012960 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.07 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.08 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT3G08030 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.07 Archaeplastida
AT5G14150 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_11174 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g55190.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g11040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41740.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g41750.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g41770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g04050.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_169757g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1867024g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_251322g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_655783g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g015620.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 204 371
IPR006946 DUF642 30 193
No external refs found!