1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g044270.2.1

Solyc12g044270.2.1


Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044270.2.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00064220 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.12 Archaeplastida
AT1G52240 ATROPGEF11,... RHO guanyl-nucleotide exchange factor 11 0.1 Archaeplastida
AT1G79860 ROPGEF12, MEE64,... RHO guanyl-nucleotide exchange factor 12 0.05 Archaeplastida
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.03 Archaeplastida
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.05 Archaeplastida
AT3G24620 ROPGEF8, ATROPGEF8 RHO guanyl-nucleotide exchange factor 8 0.11 Archaeplastida
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.14 Archaeplastida
AT5G19560 ATROPGEF10, ROPGEF10 ROP uanine nucleotide exchange factor 10 0.02 Archaeplastida
GSVIVT01015369001 No alias Multi-process regulation.Rop GTPase regulatory... 0.11 Archaeplastida
GSVIVT01017070001 No alias Multi-process regulation.Rop GTPase regulatory... 0.08 Archaeplastida
LOC_Os01g48410.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.13 Archaeplastida
LOC_Os01g55520.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.11 Archaeplastida
LOC_Os02g17240.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.09 Archaeplastida
LOC_Os02g47420.3 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os05g48640.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.07 Archaeplastida
Solyc07g032730.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Zm00001e007278_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.01 Archaeplastida
Zm00001e014205_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.1 Archaeplastida
Zm00001e019750_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Zm00001e020182_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.1 Archaeplastida
Zm00001e024760_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.12 Archaeplastida
Zm00001e026517_P004 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.11 Archaeplastida
Zm00001e034978_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 79 425
No external refs found!