1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g049220.3.1

Solyc12g049220.3.1


Description : component Tim23 of inner mitochondrion membrane TIM translocation system


Gene families : OG0001980 (Archaeplastida) Phylogenetic Tree(s): OG0001980_tree ,
OG_05_0001762 (LandPlants) Phylogenetic Tree(s): OG_05_0001762_tree ,
OG_06_0001959 (SeedPlants) Phylogenetic Tree(s): OG_06_0001959_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g049220.3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G17530 ATTIM23-1, TIM23-1 translocase of inner mitochondrial membrane 23 0.03 Archaeplastida
Cre10.g434250 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.02 Archaeplastida
GSVIVT01035979001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.03 Archaeplastida
MA_100662g0010 No alias component Tim23 of inner mitochondrion membrane TIM... 0.04 Archaeplastida
Pp3c11_5340V3.1 No alias translocase of inner mitochondrial membrane 23 0.03 Archaeplastida
Smo85570 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.03 Archaeplastida
Zm00001e039071_P001 No alias component Tim23 of inner mitochondrion membrane TIM... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!