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  5. Solyc12g056400.3.1

Solyc12g056400.3.1


Description : RING-H2-class E3 ligase


Gene families : OG0001009 (Archaeplastida) Phylogenetic Tree(s): OG0001009_tree ,
OG_05_0111421 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089428 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056400.3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Solyc01g091600.4.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e007222_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 299 341
No external refs found!