Solyc12g056980.1.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g056980.1.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.06	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.05	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.04	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G16280	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.05	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.04	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_06377	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.06	Archaeplastida
Gb_41445	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_19420g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4072g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_66442g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_9160409g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g04880.1	No alias	Ethylene-responsive transcription factor ERF008...	0.02	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.03	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e016064_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.08	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006788	heme oxidation	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0042168	heme metabolic process	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	125	174

External Links

No external refs found!

Solyc12g056980.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation