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  5. AMTR_s00033p00172620

AMTR_s00033p00172620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.122

No description available


Gene families : OG0000362 (Archaeplastida) Phylogenetic Tree(s): OG0000362_tree ,
OG_05_0000178 (LandPlants) Phylogenetic Tree(s): OG_05_0000178_tree ,
OG_06_0000719 (SeedPlants) Phylogenetic Tree(s): OG_06_0000719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00172620
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00173430 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00049p00216010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G56500 No alias serine-rich protein-related 0.02 Archaeplastida
AT5G11090 No alias serine-rich protein-related 0.03 Archaeplastida
GSVIVT01012865001 No alias No description available 0.06 Archaeplastida
Gb_04477 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_17168 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g55610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g20600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g28100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10283g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_192112g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_256405g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_39034g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_503741g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_519042g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7207868g0010 No alias No annotation 0.03 Archaeplastida
MA_75170g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_94560g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_99593g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023673_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!