Solyc12g098910.2.1

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000072 (Archaeplastida) Phylogenetic Tree(s): OG0000072_tree ,
OG_05_0000159 (LandPlants) Phylogenetic Tree(s): OG_05_0000159_tree ,
OG_06_0002778 (SeedPlants) Phylogenetic Tree(s): OG_06_0002778_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g098910.2.1
Cluster	HCCA: Cluster_231

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00229830	evm_27.TU.AmTr_v1...	External stimuli response.salinity.SOS (Salt Overly...	0.02	Archaeplastida
AMTR_s00065p00195610	No alias	Protein modification.phosphorylation.CAMK kinase...	0.03	Archaeplastida
AMTR_s00130p00110630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AT1G01140	SnRK3.12, PKS6, CIPK9	CBL-interacting protein kinase 9	0.03	Archaeplastida
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.06	Archaeplastida
AT2G38490	SnRK3.19, CIPK22	CBL-interacting protein kinase 22	0.06	Archaeplastida
AT3G23000	ATSRPK1,...	CBL-interacting protein kinase 7	0.05	Archaeplastida
AT4G24400	ATCIPK8, CIPK8,...	CBL-interacting protein kinase 8	0.05	Archaeplastida
AT5G35410	SNRK3.11, SOS2,...	Protein kinase superfamily protein	0.05	Archaeplastida
AT5G45810	CIPK19, SnRK3.5	CBL-interacting protein kinase 19	0.03	Archaeplastida
AT5G57630	CIPK21, SnRK3.4	CBL-interacting protein kinase 21	0.03	Archaeplastida
AT5G58380	PKS2, CIPK10,...	SOS3-interacting protein 1	0.07	Archaeplastida
GSVIVT01009228001	No alias	External stimuli response.salinity.SOS (Salt Overly...	0.03	Archaeplastida
GSVIVT01017690001	No alias	Protein modification.phosphorylation.CAMK kinase...	0.04	Archaeplastida
Gb_16900	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Gb_28009	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Gb_28012	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Gb_33333	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
LOC_Os08g19410.1	No alias	CBL-interacting protein kinase 25 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os09g25100.1	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
MA_134411g0010	No alias	SNF1-related protein kinase (SnRK3)	0.05	Archaeplastida
MA_31203g0010	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
MA_819000g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Solyc09g042660.4.1	No alias	SNF1-related protein kinase (SnRK3)	0.05	Archaeplastida
Zm00001e004090_P001	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Zm00001e009819_P001	No alias	SNF1-related protein kinase (SnRK3)	0.06	Archaeplastida
Zm00001e027413_P002	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e034151_P001	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e037422_P004	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	30	285
IPR001772	KA1_dom	419	446
IPR004041	NAF_dom	332	387

External Links

No external refs found!

Solyc12g098910.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation