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  5. AMTR_s00033p00207130

AMTR_s00033p00207130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.179

Description : Synaptotagmin-5 OS=Arabidopsis thaliana


Gene families : OG0000244 (Archaeplastida) Phylogenetic Tree(s): OG0000244_tree ,
OG_05_0001372 (LandPlants) Phylogenetic Tree(s): OG_05_0001372_tree ,
OG_06_0003586 (SeedPlants) Phylogenetic Tree(s): OG_06_0003586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00207130
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Solyc12g009790.2.1 No alias Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 203 286
IPR000008 C2_dom 385 466
No external refs found!