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  5. GSVIVT01000087001

GSVIVT01000087001


Description : DNA damage response.DNA repair polymerase activities.DNA polymerase zeta complex.REV3 catalytic subunit


Gene families : OG0005270 (Archaeplastida) Phylogenetic Tree(s): OG0005270_tree ,
OG_05_0007758 (LandPlants) Phylogenetic Tree(s): OG_05_0007758_tree ,
OG_06_0008496 (SeedPlants) Phylogenetic Tree(s): OG_06_0008496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000087001
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AT1G67500 ATREV3, REV3 recovery protein 3 0.06 Archaeplastida
MA_10429411g0010 No alias DNA polymerase zeta catalytic subunit OS=Arabidopsis... 0.02 Archaeplastida
Mp2g15520.1 No alias catalytic subunit REV3 of DNA polymerase zeta complex 0.05 Archaeplastida
Pp3c2_33440V3.1 No alias recovery protein 3 0.04 Archaeplastida
Solyc01g099220.3.1 No alias catalytic subunit REV3 of DNA polymerase zeta complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 56 199
IPR006133 DNA-dir_DNA_pol_B_exonuc 899 1067
IPR025687 Znf-C4pol 1631 1704
IPR006134 DNA-dir_DNA_pol_B_multi_dom 1138 1585
No external refs found!