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  5. GSVIVT01000169001

GSVIVT01000169001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type


Gene families : OG0002359 (Archaeplastida) Phylogenetic Tree(s): OG0002359_tree ,
OG_05_0001618 (LandPlants) Phylogenetic Tree(s): OG_05_0001618_tree ,
OG_06_0002609 (SeedPlants) Phylogenetic Tree(s): OG_06_0002609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000169001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Gb_37109 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 Archaeplastida
Gb_38670 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os08g01900.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_588533g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 Archaeplastida
Mp4g07620.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c5_12340V3.1 No alias RING/U-box superfamily protein with ARM repeat domain 0.06 Archaeplastida
Pp3c6_15250V3.1 No alias ARM repeat superfamily protein 0.03 Archaeplastida
Solyc01g014230.4.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc12g100000.3.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e029161_P003 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 472 511
IPR000225 Armadillo 515 552
IPR000225 Armadillo 433 470
IPR003613 Ubox_domain 236 306
No external refs found!