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  5. GSVIVT01000449001

GSVIVT01000449001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000449001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00068p00092800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00105590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.06 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.04 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.04 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.06 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.07 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.03 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.03 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.04 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.06 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.08 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.04 Archaeplastida
AT4G25560 AtMYB18, MYB18 myb domain protein 18 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.03 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.06 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.06 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.03 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.03 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.02 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.07 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03400 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09907 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_23187 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os01g28280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os02g49986.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.08 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g29614.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g38210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.12 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g36250.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_134436g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30864g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_33964g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_3665g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_76990g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_87695g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95534g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.03 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.04 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.04 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc03g093940.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012681_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020140_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e022280_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!