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  5. GSVIVT01000840001

GSVIVT01000840001


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000840001
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000663001 No alias Putative disease resistance protein At3g14460... 0.02 Archaeplastida
GSVIVT01001446001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01001453001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01001457001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01013512001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 Archaeplastida
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022962001 No alias Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.02 Archaeplastida
GSVIVT01023011001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01023015001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01038304001 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 130 223
No external refs found!