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  5. GSVIVT01000962001

GSVIVT01000962001


Description : Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0111562 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089580 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000962001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270130 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00029p00217840 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.perception and signal... 0.02 Archaeplastida
AT3G26810 AFB2 auxin signaling F-box 2 0.03 Archaeplastida
LOC_Os11g31620.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
MA_372199g0010 No alias No annotation 0.03 Archaeplastida
Pp3c18_16630V3.1 No alias GRR1-like protein 1 0.02 Archaeplastida
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e023831_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e031742_P001 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!