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  5. GSVIVT01001068001

GSVIVT01001068001


Description : Class V chitinase OS=Arabidopsis thaliana


Gene families : OG0000905 (Archaeplastida) Phylogenetic Tree(s): OG0000905_tree ,
OG_05_0000646 (LandPlants) Phylogenetic Tree(s): OG_05_0000646_tree ,
OG_06_0000436 (SeedPlants) Phylogenetic Tree(s): OG_06_0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001068001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001059001 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01001074001 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04927 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.02 Archaeplastida
Gb_10730 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4308823g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g005100.4.1 No alias Class V chitinase OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 32 351
No external refs found!