1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00033p00238470

AMTR_s00033p00238470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.250

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.SUMO-specific protease families.ULP2 protease


Gene families : OG0001011 (Archaeplastida) Phylogenetic Tree(s): OG0001011_tree ,
OG_05_0000935 (LandPlants) Phylogenetic Tree(s): OG_05_0000935_tree ,
OG_06_0006007 (SeedPlants) Phylogenetic Tree(s): OG_06_0006007_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00238470
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278197 No alias Probable ubiquitin-like-specific protease 2B... 0.02 Archaeplastida
GSVIVT01020234001 No alias No description available 0.03 Archaeplastida
Gb_04525 No alias protease (SPF) 0.03 Archaeplastida
LOC_Os05g11770.1 No alias protease (SPF) 0.02 Archaeplastida
MA_10435078g0010 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 411 599
No external refs found!