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  5. GSVIVT01001170001

GSVIVT01001170001


Description : Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001170001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.13 Archaeplastida
AT3G22500 ATECP31 Seed maturation protein 0.14 Archaeplastida
AT5G53260 No alias Seed maturation protein 0.09 Archaeplastida
AT5G53270 No alias Seed maturation protein 0.06 Archaeplastida
LOC_Os03g06360.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
LOC_Os03g53610.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.07 Archaeplastida
LOC_Os03g53620.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g23350.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.12 Archaeplastida
LOC_Os10g29570.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g43140.1 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_326206g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c25_10310V3.1 No alias Seed maturation protein 0.03 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.12 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.13 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
Zm00001e000449_P001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.05 Archaeplastida
Zm00001e005665_P002 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.07 Archaeplastida
Zm00001e005666_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 199 257
IPR007011 SMP 17 72
IPR007011 SMP 134 191
No external refs found!