GSVIVT01001999001


Description : Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin


Gene families : OG0008039 (Archaeplastida) Phylogenetic Tree(s): OG0008039_tree ,
OG_05_0007871 (LandPlants) Phylogenetic Tree(s): OG_05_0007871_tree ,
OG_06_0008316 (SeedPlants) Phylogenetic Tree(s): OG_06_0008316_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001999001
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g53490.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 Archaeplastida
MA_11407g0010 No alias LCNP non-photochemical quenching regulator lipocalin 0.02 Archaeplastida
Solyc12g005180.2.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 130 290
No external refs found!