Coexpression cluster: Cluster_88 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 7.87% (7/89) 5.49 0.0 0.0
GO:0009521 photosystem 6.74% (6/89) 5.51 0.0 0.0
GO:0015979 photosynthesis 6.74% (6/89) 5.55 0.0 0.0
GO:0098796 membrane protein complex 6.74% (6/89) 3.72 7e-06 0.000523
GO:0009522 photosystem I 3.37% (3/89) 5.89 1.6e-05 0.001037
GO:0009523 photosystem II 3.37% (3/89) 5.4 4.7e-05 0.00249
GO:0004332 fructose-bisphosphate aldolase activity 2.25% (2/89) 6.89 0.000112 0.005044
GO:0032991 protein-containing complex 10.11% (9/89) 2.11 0.00024 0.007571
GO:0016832 aldehyde-lyase activity 2.25% (2/89) 6.4 0.000234 0.008203
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 2.25% (2/89) 6.4 0.000234 0.008203
GO:0044424 intracellular part 12.36% (11/89) 1.76 0.000391 0.011192
GO:0044464 cell part 12.36% (11/89) 1.67 0.000647 0.016994
GO:0071949 FAD binding 2.25% (2/89) 5.51 0.000859 0.020816
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.25% (2/89) 5.12 0.001485 0.031181
GO:0009654 photosystem II oxygen evolving complex 2.25% (2/89) 5.12 0.001485 0.031181
GO:0019693 ribose phosphate metabolic process 3.37% (3/89) 3.57 0.002111 0.031664
GO:1990204 oxidoreductase complex 2.25% (2/89) 4.89 0.002061 0.032456
GO:0009259 ribonucleotide metabolic process 3.37% (3/89) 3.64 0.001804 0.033431
GO:0009150 purine ribonucleotide metabolic process 3.37% (3/89) 3.64 0.001804 0.033431
GO:0072521 purine-containing compound metabolic process 3.37% (3/89) 3.59 0.002031 0.033679
GO:0006163 purine nucleotide metabolic process 3.37% (3/89) 3.6 0.001954 0.034192
GO:0044425 membrane part 8.99% (8/89) 1.76 0.002546 0.036449
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors 1.12% (1/89) 8.21 0.003378 0.038004
GO:0008942 nitrite reductase [NAD(P)H] activity 1.12% (1/89) 8.21 0.003378 0.038004
GO:0098809 nitrite reductase activity 1.12% (1/89) 8.21 0.003378 0.038004
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 1.12% (1/89) 8.21 0.003378 0.038004
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 1.12% (1/89) 8.21 0.003378 0.038004
GO:0034404 nucleobase-containing small molecule biosynthetic process 2.25% (2/89) 3.82 0.008899 0.038401
GO:0046496 nicotinamide nucleotide metabolic process 2.25% (2/89) 3.82 0.008899 0.038401
GO:0016830 carbon-carbon lyase activity 2.25% (2/89) 3.82 0.008899 0.038401
GO:0019362 pyridine nucleotide metabolic process 2.25% (2/89) 3.82 0.008899 0.038401
GO:0006753 nucleoside phosphate metabolic process 3.37% (3/89) 3.3 0.003541 0.038467
GO:0006733 oxidoreduction coenzyme metabolic process 2.25% (2/89) 3.78 0.009313 0.038601
GO:0072524 pyridine-containing compound metabolic process 2.25% (2/89) 3.78 0.009313 0.038601
GO:0046434 organophosphate catabolic process 2.25% (2/89) 3.78 0.009313 0.038601
GO:0046394 carboxylic acid biosynthetic process 3.37% (3/89) 2.94 0.007175 0.038968
GO:0016053 organic acid biosynthetic process 3.37% (3/89) 2.94 0.007175 0.038968
GO:0009166 nucleotide catabolic process 2.25% (2/89) 4.0 0.006959 0.039147
GO:0006090 pyruvate metabolic process 2.25% (2/89) 4.0 0.006959 0.039147
GO:0006082 organic acid metabolic process 4.49% (4/89) 2.32 0.008586 0.039198
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 1.12% (1/89) 7.21 0.006745 0.039346
GO:0009512 cytochrome b6f complex 1.12% (1/89) 7.21 0.006745 0.039346
GO:0042135 neurotransmitter catabolic process 1.12% (1/89) 7.21 0.006745 0.039346
GO:0009071 serine family amino acid catabolic process 1.12% (1/89) 7.21 0.006745 0.039346
GO:0001505 regulation of neurotransmitter levels 1.12% (1/89) 7.21 0.006745 0.039346
GO:0004375 glycine dehydrogenase (decarboxylating) activity 1.12% (1/89) 7.21 0.006745 0.039346
GO:0006544 glycine metabolic process 1.12% (1/89) 7.21 0.006745 0.039346
GO:0006546 glycine catabolic process 1.12% (1/89) 7.21 0.006745 0.039346
GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 1.12% (1/89) 7.21 0.006745 0.039346
GO:0042133 neurotransmitter metabolic process 1.12% (1/89) 7.21 0.006745 0.039346
GO:0072525 pyridine-containing compound biosynthetic process 2.25% (2/89) 3.85 0.008494 0.039348
GO:1901292 nucleoside phosphate catabolic process 2.25% (2/89) 3.85 0.008494 0.039348
GO:1901605 alpha-amino acid metabolic process 2.25% (2/89) 3.85 0.008494 0.039348
GO:1901575 organic substance catabolic process 3.37% (3/89) 2.75 0.010205 0.04069
GO:0003747 translation release factor activity 1.12% (1/89) 6.62 0.010101 0.040791
GO:0008079 translation termination factor activity 1.12% (1/89) 6.62 0.010101 0.040791
GO:0043436 oxoacid metabolic process 4.49% (4/89) 2.33 0.008463 0.041012
GO:0009987 cellular process 21.35% (19/89) 0.94 0.003908 0.041032
GO:0019363 pyridine nucleotide biosynthetic process 2.25% (2/89) 3.89 0.008097 0.04114
GO:0019359 nicotinamide nucleotide biosynthetic process 2.25% (2/89) 3.89 0.008097 0.04114
GO:1901566 organonitrogen compound biosynthetic process 5.62% (5/89) 2.0 0.008433 0.041507
GO:0019752 carboxylic acid metabolic process 4.49% (4/89) 2.33 0.00834 0.041702
GO:0044248 cellular catabolic process 3.37% (3/89) 2.89 0.007874 0.042038
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0009161 ribonucleoside monophosphate metabolic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0009260 ribonucleotide biosynthetic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0009152 purine ribonucleotide biosynthetic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0009126 purine nucleoside monophosphate metabolic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0046390 ribose phosphate biosynthetic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:0009123 nucleoside monophosphate metabolic process 2.25% (2/89) 3.33 0.017042 0.042271
GO:1901135 carbohydrate derivative metabolic process 3.37% (3/89) 2.88 0.008055 0.042286
GO:0009117 nucleotide metabolic process 3.37% (3/89) 3.37 0.003115 0.042663
GO:0009141 nucleoside triphosphate metabolic process 2.25% (2/89) 3.3 0.017592 0.043292
GO:0009056 catabolic process 3.37% (3/89) 2.71 0.011062 0.043555
GO:0034035 purine ribonucleoside bisphosphate metabolic process 1.12% (1/89) 6.21 0.013445 0.043661
GO:0015969 guanosine tetraphosphate metabolic process 1.12% (1/89) 6.21 0.013445 0.043661
GO:0034357 photosynthetic membrane 1.12% (1/89) 6.21 0.013445 0.043661
GO:0042651 thylakoid membrane 1.12% (1/89) 6.21 0.013445 0.043661
GO:0048285 organelle fission 1.12% (1/89) 6.21 0.013445 0.043661
GO:0016559 peroxisome fission 1.12% (1/89) 6.21 0.013445 0.043661
GO:0006542 glutamine biosynthetic process 1.12% (1/89) 6.21 0.013445 0.043661
GO:0006541 glutamine metabolic process 1.12% (1/89) 6.21 0.013445 0.043661
GO:0009069 serine family amino acid metabolic process 1.12% (1/89) 5.89 0.016778 0.044043
GO:0016854 racemase and epimerase activity 1.12% (1/89) 5.89 0.016778 0.044043
GO:0070069 cytochrome complex 1.12% (1/89) 5.89 0.016778 0.044043
GO:0004602 glutathione peroxidase activity 1.12% (1/89) 5.89 0.016778 0.044043
GO:0005779 integral component of peroxisomal membrane 1.12% (1/89) 5.89 0.016778 0.044043
GO:1901606 alpha-amino acid catabolic process 1.12% (1/89) 5.89 0.016778 0.044043
GO:0031231 intrinsic component of peroxisomal membrane 1.12% (1/89) 5.89 0.016778 0.044043
GO:0009538 photosystem I reaction center 1.12% (1/89) 5.89 0.016778 0.044043
GO:0044438 microbody part 1.12% (1/89) 5.89 0.016778 0.044043
GO:0044439 peroxisomal part 1.12% (1/89) 5.89 0.016778 0.044043
GO:0006164 purine nucleotide biosynthetic process 2.25% (2/89) 3.28 0.018149 0.044317
GO:0006091 generation of precursor metabolites and energy 2.25% (2/89) 3.48 0.013906 0.044697
GO:0008152 metabolic process 25.84% (23/89) 0.63 0.018527 0.044894
GO:0009063 cellular amino acid catabolic process 1.12% (1/89) 5.62 0.0201 0.044905
GO:0031301 integral component of organelle membrane 1.12% (1/89) 5.62 0.0201 0.044905
GO:0031300 intrinsic component of organelle membrane 1.12% (1/89) 5.62 0.0201 0.044905
GO:0004356 glutamate-ammonia ligase activity 1.12% (1/89) 5.62 0.0201 0.044905
GO:0016211 ammonia ligase activity 1.12% (1/89) 5.62 0.0201 0.044905
GO:0016880 acid-ammonia (or amide) ligase activity 1.12% (1/89) 5.62 0.0201 0.044905
GO:0042278 purine nucleoside metabolic process 1.12% (1/89) 5.62 0.0201 0.044905
GO:0046128 purine ribonucleoside metabolic process 1.12% (1/89) 5.62 0.0201 0.044905
GO:1901068 guanosine-containing compound metabolic process 1.12% (1/89) 5.62 0.0201 0.044905
GO:0072522 purine-containing compound biosynthetic process 2.25% (2/89) 3.26 0.018713 0.044997
GO:0009199 ribonucleoside triphosphate metabolic process 2.25% (2/89) 3.4 0.01544 0.045453
GO:0046700 heterocycle catabolic process 2.25% (2/89) 3.4 0.01544 0.045453
GO:0009144 purine nucleoside triphosphate metabolic process 2.25% (2/89) 3.4 0.01544 0.045453
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.25% (2/89) 3.4 0.01544 0.045453
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.25% (2/89) 3.43 0.01492 0.045631
GO:0009124 nucleoside monophosphate biosynthetic process 2.25% (2/89) 3.43 0.01492 0.045631
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.25% (2/89) 3.43 0.01492 0.045631
GO:0046034 ATP metabolic process 2.25% (2/89) 3.43 0.01492 0.045631
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.25% (2/89) 3.43 0.01492 0.045631
GO:0019439 aromatic compound catabolic process 2.25% (2/89) 3.38 0.015966 0.045721
GO:1901361 organic cyclic compound catabolic process 2.25% (2/89) 3.38 0.015966 0.045721
GO:0044270 cellular nitrogen compound catabolic process 2.25% (2/89) 3.38 0.015966 0.045721
GO:0009142 nucleoside triphosphate biosynthetic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0034655 nucleobase-containing compound catabolic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0006754 ATP biosynthetic process 2.25% (2/89) 3.54 0.012922 0.045737
GO:0009108 coenzyme biosynthetic process 2.25% (2/89) 3.23 0.019285 0.04602
GO:0016052 carbohydrate catabolic process 2.25% (2/89) 3.59 0.011971 0.046555
GO:0019637 organophosphate metabolic process 3.37% (3/89) 2.65 0.012189 0.046825
GO:0044283 small molecule biosynthetic process 3.37% (3/89) 2.64 0.012422 0.047146
GO:0042866 pyruvate biosynthetic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0046031 ADP metabolic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0009185 ribonucleoside diphosphate metabolic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0009132 nucleoside diphosphate metabolic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0006165 nucleoside diphosphate phosphorylation 2.25% (2/89) 4.04 0.006598 0.047233
GO:0009135 purine nucleoside diphosphate metabolic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0006757 ATP generation from ADP 2.25% (2/89) 4.04 0.006598 0.047233
GO:0006096 glycolytic process 2.25% (2/89) 4.04 0.006598 0.047233
GO:0046939 nucleotide phosphorylation 2.25% (2/89) 4.04 0.006598 0.047233
GO:0017144 drug metabolic process 3.37% (3/89) 3.14 0.004892 0.049706
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_29 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_69 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.054 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.073 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.061 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.051 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.039 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.127 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_59 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.057 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.051 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.055 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_182 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.073 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.044 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.051 Archaeplastida Compare
Gingko biloba HCCA Cluster_311 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.084 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_184 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.076 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_240 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.065 Archaeplastida Compare
Zea mays HCCA Cluster_326 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.065 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.071 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_123 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.085 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_177 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.047 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.053 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_144 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.127 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.088 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_40 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_65 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.071 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.048 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.055 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.049 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.085 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.05 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.086 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_40 0.038 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_96 0.041 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.049 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_129 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.06 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_174 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.165 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_81 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_145 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.053 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_205 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_16 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.024 Archaeplastida Compare
Sequences (89) (download table)

InterPro Domains

GO Terms

Family Terms