GSVIVT01002262001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01002262001
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00143340	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00025p00218200	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF015...	0.03	Archaeplastida
AMTR_s00077p00176570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G36900	DEAR4, RAP2.10	related to AP2 10	0.07	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g39590.3	No alias	Dehydration-responsive element-binding protein 2D...	0.03	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_166248g0010	No alias	transcription factor (ERF)	0.07	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_364562g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_5629699g0010	No alias	transcription factor (DREB)	0.07	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9565296g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Pp3c1_7740V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Zm00001e019566_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e026911_P005	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e041532_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	95	144

External Links

No external refs found!

GSVIVT01002262001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation