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  5. GSVIVT01003988001

GSVIVT01003988001


Description : Protein terminal ear1 OS=Zea mays


Gene families : OG0001662 (Archaeplastida) Phylogenetic Tree(s): OG0001662_tree ,
OG_05_0001155 (LandPlants) Phylogenetic Tree(s): OG_05_0001155_tree ,
OG_06_0000931 (SeedPlants) Phylogenetic Tree(s): OG_06_0000931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003988001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00134910 evm_27.TU.AmTr_v1... Protein terminal ear1 OS=Zea mays 0.03 Archaeplastida
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.05 Archaeplastida
AT1G67770 TEL2 terminal EAR1-like 2 0.07 Archaeplastida
AT3G26120 TEL1 terminal EAR1-like 1 0.03 Archaeplastida
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.03 Archaeplastida
Gb_20291 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 Archaeplastida
Gb_21853 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.04 Archaeplastida
LOC_Os01g68000.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.06 Archaeplastida
LOC_Os09g36140.1 No alias Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_477594g0010 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_68449g0010 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp1g04100.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 Archaeplastida
Pp3c9_23750V3.1 No alias terminal EAR1-like 1 0.04 Archaeplastida
Solyc05g013930.2.1 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.12 Archaeplastida
Solyc05g056360.2.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.1 Archaeplastida
Zm00001e018912_P001 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 325 434
IPR000504 RRM_dom 97 161
No external refs found!