1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01005045001

GSVIVT01005045001


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component


Gene families : OG0002938 (Archaeplastida) Phylogenetic Tree(s): OG0002938_tree ,
OG_05_0005555 (LandPlants) Phylogenetic Tree(s): OG_05_0005555_tree ,
OG_06_0006357 (SeedPlants) Phylogenetic Tree(s): OG_06_0006357_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005045001
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT3G57290 TIF3E1, INT6,... eukaryotic translation initiation factor 3E 0.06 Archaeplastida
Cpa|evm.model.tig00000093.43 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Cre12.g498100 No alias Protein biosynthesis.translation... 0.04 Archaeplastida
LOC_Os07g12110.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
MA_7274g0020 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Mp3g01990.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Pp3c20_5690V3.1 No alias eukaryotic translation initiation factor 3E 0.05 Archaeplastida
Smo269977 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Solyc10g079880.2.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.08 Archaeplastida
Zm00001e009393_P005 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000717 PCI_dom 231 345
IPR019010 eIF3e_N 1 83
No external refs found!