Coexpression cluster: Cluster_172 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044464 cell part 22.62% (19/84) 2.55 0.0 0.0
GO:0043228 non-membrane-bounded organelle 11.9% (10/84) 3.76 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.9% (10/84) 3.76 0.0 0.0
GO:0044424 intracellular part 20.24% (17/84) 2.47 0.0 0.0
GO:0005622 intracellular 9.52% (8/84) 4.12 0.0 1e-06
GO:1990904 ribonucleoprotein complex 10.71% (9/84) 3.62 0.0 1e-06
GO:0044444 cytoplasmic part 13.1% (11/84) 3.1 0.0 1e-06
GO:0043226 organelle 14.29% (12/84) 2.87 0.0 2e-06
GO:0043229 intracellular organelle 14.29% (12/84) 2.87 0.0 2e-06
GO:0043043 peptide biosynthetic process 9.52% (8/84) 3.59 0.0 5e-06
GO:0003735 structural constituent of ribosome 9.52% (8/84) 3.6 0.0 5e-06
GO:0006412 translation 9.52% (8/84) 3.61 0.0 5e-06
GO:0006518 peptide metabolic process 9.52% (8/84) 3.54 0.0 5e-06
GO:0043604 amide biosynthetic process 9.52% (8/84) 3.54 0.0 5e-06
GO:0005198 structural molecule activity 9.52% (8/84) 3.53 0.0 5e-06
GO:0005840 ribosome 9.52% (8/84) 3.61 0.0 5e-06
GO:0043603 cellular amide metabolic process 9.52% (8/84) 3.48 1e-06 6e-06
GO:0030490 maturation of SSU-rRNA 2.38% (2/84) 8.29 1e-05 8.9e-05
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2.38% (2/84) 8.29 1e-05 8.9e-05
GO:1901566 organonitrogen compound biosynthetic process 9.52% (8/84) 2.76 2.4e-05 0.000203
GO:0034645 cellular macromolecule biosynthetic process 9.52% (8/84) 2.72 3e-05 0.000238
GO:0034641 cellular nitrogen compound metabolic process 13.1% (11/84) 2.09 5.2e-05 0.000398
GO:0009059 macromolecule biosynthetic process 9.52% (8/84) 2.59 5.6e-05 0.000411
GO:0005575 cellular_component 22.62% (19/84) 1.42 6.2e-05 0.000432
GO:0044271 cellular nitrogen compound biosynthetic process 9.52% (8/84) 2.53 7.5e-05 0.000507
GO:0003676 nucleic acid binding 15.48% (13/84) 1.77 0.000102 0.000637
GO:0003723 RNA binding 7.14% (6/84) 3.0 0.000107 0.000645
GO:0005730 nucleolus 2.38% (2/84) 6.97 0.0001 0.000645
GO:0032991 protein-containing complex 10.71% (9/84) 2.19 0.000154 0.000894
GO:0044429 mitochondrial part 3.57% (3/84) 4.56 0.000284 0.001589
GO:0005741 mitochondrial outer membrane 2.38% (2/84) 6.12 0.000356 0.001814
GO:0031968 organelle outer membrane 2.38% (2/84) 6.12 0.000356 0.001814
GO:0098805 whole membrane 2.38% (2/84) 6.12 0.000356 0.001814
GO:0022613 ribonucleoprotein complex biogenesis 2.38% (2/84) 5.83 0.000542 0.00253
GO:0042254 ribosome biogenesis 2.38% (2/84) 5.83 0.000542 0.00253
GO:0003697 single-stranded DNA binding 2.38% (2/84) 5.83 0.000542 0.00253
GO:0044085 cellular component biogenesis 2.38% (2/84) 5.59 0.000766 0.003386
GO:0019867 outer membrane 2.38% (2/84) 5.59 0.000766 0.003386
GO:0098588 bounding membrane of organelle 2.38% (2/84) 5.39 0.001027 0.004422
GO:0016072 rRNA metabolic process 2.38% (2/84) 5.12 0.001487 0.006092
GO:0006364 rRNA processing 2.38% (2/84) 5.12 0.001487 0.006092
GO:0019843 rRNA binding 2.38% (2/84) 5.05 0.001658 0.006633
GO:0044249 cellular biosynthetic process 9.52% (8/84) 1.83 0.001827 0.007139
GO:0044446 intracellular organelle part 5.95% (5/84) 2.51 0.001915 0.007148
GO:0044422 organelle part 5.95% (5/84) 2.51 0.001915 0.007148
GO:0031966 mitochondrial membrane 2.38% (2/84) 4.83 0.002226 0.00813
GO:1901576 organic substance biosynthetic process 9.52% (8/84) 1.75 0.002615 0.009346
GO:0030686 90S preribosome 1.19% (1/84) 8.29 0.003188 0.009739
GO:0031360 intrinsic component of thylakoid membrane 1.19% (1/84) 8.29 0.003188 0.009739
GO:0031361 integral component of thylakoid membrane 1.19% (1/84) 8.29 0.003188 0.009739
GO:0008186 RNA-dependent ATPase activity 1.19% (1/84) 8.29 0.003188 0.009739
GO:0004004 ATP-dependent RNA helicase activity 1.19% (1/84) 8.29 0.003188 0.009739
GO:0003724 RNA helicase activity 1.19% (1/84) 8.29 0.003188 0.009739
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.38% (2/84) 4.54 0.003348 0.009867
GO:0016859 cis-trans isomerase activity 2.38% (2/84) 4.54 0.003348 0.009867
GO:0031090 organelle membrane 2.38% (2/84) 4.49 0.003598 0.010422
GO:0018208 peptidyl-proline modification 2.38% (2/84) 4.59 0.003106 0.01065
GO:0000413 protein peptidyl-prolyl isomerization 2.38% (2/84) 4.59 0.003106 0.01065
GO:0006396 RNA processing 3.57% (3/84) 3.06 0.005689 0.016198
GO:0044267 cellular protein metabolic process 11.9% (10/84) 1.34 0.006052 0.016667
GO:0009058 biosynthetic process 9.52% (8/84) 1.55 0.006042 0.016918
GO:0030515 snoRNA binding 1.19% (1/84) 7.29 0.006367 0.016978
GO:0030688 preribosome, small subunit precursor 1.19% (1/84) 7.29 0.006367 0.016978
GO:0018193 peptidyl-amino acid modification 2.38% (2/84) 3.94 0.007599 0.019946
GO:0005759 mitochondrial matrix 1.19% (1/84) 6.29 0.012693 0.032807
GO:0034470 ncRNA processing 2.38% (2/84) 3.49 0.013837 0.035222
GO:0001882 nucleoside binding 3.57% (3/84) 2.48 0.016911 0.035963
GO:0043170 macromolecule metabolic process 15.48% (13/84) 0.94 0.016751 0.036078
GO:0044237 cellular metabolic process 16.67% (14/84) 0.9 0.016747 0.036538
GO:1901363 heterocyclic compound binding 21.43% (18/84) 0.76 0.016731 0.036984
GO:0097159 organic cyclic compound binding 21.43% (18/84) 0.76 0.016731 0.036984
GO:0019001 guanyl nucleotide binding 3.57% (3/84) 2.44 0.017985 0.037768
GO:0005525 GTP binding 3.57% (3/84) 2.49 0.016648 0.037796
GO:0032561 guanyl ribonucleotide binding 3.57% (3/84) 2.49 0.016648 0.037796
GO:0001883 purine nucleoside binding 3.57% (3/84) 2.49 0.016648 0.037796
GO:0032550 purine ribonucleoside binding 3.57% (3/84) 2.49 0.016648 0.037796
GO:0032549 ribonucleoside binding 3.57% (3/84) 2.49 0.016648 0.037796
GO:0008097 5S rRNA binding 1.19% (1/84) 5.71 0.01898 0.038417
GO:0008026 ATP-dependent helicase activity 1.19% (1/84) 5.71 0.01898 0.038417
GO:0070035 purine NTP-dependent helicase activity 1.19% (1/84) 5.71 0.01898 0.038417
GO:0043233 organelle lumen 1.19% (1/84) 5.97 0.015842 0.038571
GO:0070013 intracellular organelle lumen 1.19% (1/84) 5.97 0.015842 0.038571
GO:0031974 membrane-enclosed lumen 1.19% (1/84) 5.97 0.015842 0.038571
GO:0030684 preribosome 1.19% (1/84) 5.49 0.022108 0.044217
GO:0004045 aminoacyl-tRNA hydrolase activity 1.19% (1/84) 5.29 0.025227 0.049281
GO:0044428 nuclear part 2.38% (2/84) 3.03 0.025185 0.049778
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_23 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.121 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.053 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.09 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.049 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.07 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_263 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.064 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_203 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.053 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.054 Archaeplastida Compare
Gingko biloba HCCA Cluster_77 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.081 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.044 Archaeplastida Compare
Gingko biloba HCCA Cluster_248 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_309 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.056 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.067 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.077 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.049 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.099 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_91 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_16 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.054 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_185 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.058 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.061 Archaeplastida Compare
Picea abies HCCA Cluster_181 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.042 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.096 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.065 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.046 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_185 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.094 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.071 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.095 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.053 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.071 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.023 Archaeplastida Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms