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  5. GSVIVT01005189001

GSVIVT01005189001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001256 (LandPlants) Phylogenetic Tree(s): OG_05_0001256_tree ,
OG_06_0001765 (SeedPlants) Phylogenetic Tree(s): OG_06_0001765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005189001
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.04 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.04 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.04 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00000821.27 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Cre01.g000700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01038717001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04647 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.06 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_227897g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_9515738g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c13_4710V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 189 232
No external refs found!