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  5. AMTR_s00035p00205430

AMTR_s00035p00205430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00035.43

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00035p00205430
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016352001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033273001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Gb_05487 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os01g59780.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.03 Archaeplastida
LOC_Os03g56050.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os04g55560.2 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os05g03040.1 No alias transcription factor (AP2) 0.09 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os07g13170.2 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os11g03540.1 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_113625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_75070g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_8090186g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
Mp8g11450.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Pp3c15_4400V3.1 No alias target of early activation tagged (EAT) 2 0.03 Archaeplastida
Solyc02g064960.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc03g123430.4.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc04g049800.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e000558_P003 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e011539_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e019489_P001 No alias transcription factor (AP2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006449 regulation of translational termination IEP Neighborhood
BP GO:0006452 translational frameshifting IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045901 positive regulation of translational elongation IEP Neighborhood
BP GO:0045905 positive regulation of translational termination IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 268 318
IPR001471 AP2/ERF_dom 176 225
No external refs found!