1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01005271001

GSVIVT01005271001


Description : Probable terpene synthase 13 OS=Ricinus communis


Gene families : OG0003886 (Archaeplastida) Phylogenetic Tree(s): OG0003886_tree ,
OG_05_0002695 (LandPlants) Phylogenetic Tree(s): OG_05_0002695_tree ,
OG_06_0001548 (SeedPlants) Phylogenetic Tree(s): OG_06_0001548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005271001
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005220001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.03 Archaeplastida
GSVIVT01006465001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.03 Archaeplastida
GSVIVT01006468001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.04 Archaeplastida
GSVIVT01007468001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.06 Archaeplastida
Solyc05g026590.2.1 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 181 352
IPR001906 Terpene_synth_N 1 117
No external refs found!