GSVIVT01005320001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01005320001
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000642001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01013533001	No alias	Putative disease resistance RPP13-like protein 1...	0.09	Archaeplastida
GSVIVT01019351001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.03	Archaeplastida
GSVIVT01022963001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01026092001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01027270001	No alias	Putative disease resistance protein At3g14460...	0.03	Archaeplastida
GSVIVT01027276001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01032183001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	Archaeplastida
GSVIVT01032204001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.03	Archaeplastida
GSVIVT01034675001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	58	113

External Links

No external refs found!