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  5. GSVIVT01005816001

GSVIVT01005816001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005816001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01035363001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Pp3c4_17230V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e037865_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 89 133
No external refs found!