1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01005821001

GSVIVT01005821001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor


Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0000278 (LandPlants) Phylogenetic Tree(s): OG_05_0000278_tree ,
OG_06_0000297 (SeedPlants) Phylogenetic Tree(s): OG_06_0000297_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005821001
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT2G44910 HB4, ATHB-4, ATHB4 homeobox-leucine zipper protein 4 0.04 Archaeplastida
AT3G60390 HAT3 homeobox-leucine zipper protein 3 0.03 Archaeplastida
Gb_12394 No alias Homeobox-leucine zipper protein HOX11 OS=Oryza sativa... 0.03 Archaeplastida
Mp2g24200.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Pp3c11_21670V3.1 No alias homeobox from Arabidopsis thaliana 0.02 Archaeplastida
Pp3c7_6850V3.1 No alias homeobox from Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e020345_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e022765_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 194 228
IPR001356 Homeobox_dom 138 192
IPR006712 HD-ZIP_N 2 112
No external refs found!