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  5. AMTR_s00036p00060130

AMTR_s00036p00060130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.19

Description : Cell wall.cutin and suberin.cuticular lipid formation.omega-hydroxy fatty acyl dehydrogenase


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0000864 (LandPlants) Phylogenetic Tree(s): OG_05_0000864_tree ,
OG_06_0000685 (SeedPlants) Phylogenetic Tree(s): OG_06_0000685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00060130
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
AT1G14185 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Archaeplastida
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.06 Archaeplastida
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Archaeplastida
AT5G51930 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Archaeplastida
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01013124001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01016856001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.06 Archaeplastida
Gb_00810 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_00812 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_00922 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_12981 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19558 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_38453 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g48400.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g19930.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434331g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_423598g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_577764g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c18_11920V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
Pp3c21_17460V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
Pp3c9_17010V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g121600.4.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida
Solyc06g035580.3.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc06g062600.3.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.04 Archaeplastida
Zm00001e004200_P002 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida
Zm00001e033949_P001 No alias omega-hydroxy fatty acyl dehydrogenase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 411 557
IPR000172 GMC_OxRdtase_N 42 315
No external refs found!