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  5. GSVIVT01006468001

GSVIVT01006468001


Description : (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca


Gene families : OG0003886 (Archaeplastida) Phylogenetic Tree(s): OG0003886_tree ,
OG_05_0002695 (LandPlants) Phylogenetic Tree(s): OG_05_0002695_tree ,
OG_06_0001548 (SeedPlants) Phylogenetic Tree(s): OG_06_0001548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006468001
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005220001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.02 Archaeplastida
GSVIVT01005271001 No alias Probable terpene synthase 13 OS=Ricinus communis 0.04 Archaeplastida
GSVIVT01006466001 No alias (3S,6E)-nerolidol synthase 1 OS=Fragaria ananassa 0.04 Archaeplastida
GSVIVT01007468001 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria vesca 0.03 Archaeplastida
LOC_Os10g34790.1 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Solyc05g026590.2.1 No alias mono-/sesquiterpene-/diterpene synthase 0.05 Archaeplastida
Solyc05g026600.3.1 No alias (3S,6E)-nerolidol synthase 1, chloroplastic OS=Fragaria... 0.03 Archaeplastida
Solyc10g005410.4.1 No alias mono-/sesquiterpene-/diterpene synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 6 132
No external refs found!