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  5. AMTR_s00036p00194520

AMTR_s00036p00194520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.107

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.beta subunit


Gene families : OG0002096 (Archaeplastida) Phylogenetic Tree(s): OG0002096_tree ,
OG_05_0002286 (LandPlants) Phylogenetic Tree(s): OG_05_0002286_tree ,
OG_06_0002049 (SeedPlants) Phylogenetic Tree(s): OG_06_0002049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00194520
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G45070 SEC61 BETA Preprotein translocase Sec, Sec61-beta subunit protein 0.03 Archaeplastida
AT5G60460 No alias Preprotein translocase Sec, Sec61-beta subunit protein 0.06 Archaeplastida
LOC_Os12g07490.1 No alias subunit beta of co-translational insertion system Sec61... 0.04 Archaeplastida
Pp3c19_6510V3.1 No alias Preprotein translocase Sec, Sec61-beta subunit protein 0.03 Archaeplastida
Pp3c21_9640V3.1 No alias Preprotein translocase Sec, Sec61-beta subunit protein 0.02 Archaeplastida
Smo39587 No alias Protein translocation.endoplasmic... 0.03 Archaeplastida
Zm00001e027757_P001 No alias subunit beta of co-translational insertion system Sec61... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!