Description : 40S ribosomal protein S9-2 OS=Arabidopsis thaliana
Gene families : OG0001616 (Archaeplastida) Phylogenetic Tree(s): OG0001616_tree ,
OG_05_0001469 (LandPlants) Phylogenetic Tree(s): OG_05_0001469_tree ,
OG_06_0001978 (SeedPlants) Phylogenetic Tree(s): OG_06_0001978_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01008028001 | |
Cluster | HCCA: Cluster_172 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G15200 | No alias | Ribosomal protein S4 | 0.21 | Archaeplastida | |
Cpa|evm.model.tig00000826.24 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Cre08.g359750 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.17 | Archaeplastida | |
GSVIVT01020020001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
Gb_41315 | No alias | component RPS9 of SSU proteome | 0.11 | Archaeplastida | |
LOC_Os03g05980.1 | No alias | component RPS9 of SSU proteome | 0.17 | Archaeplastida | |
LOC_Os11g38959.1 | No alias | component RPS9 of SSU proteome | 0.12 | Archaeplastida | |
MA_10429805g0030 | No alias | component RPS9 of SSU proteome | 0.08 | Archaeplastida | |
MA_10431745g0020 | No alias | component RPS9 of SSU proteome | 0.09 | Archaeplastida | |
Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.19 | Archaeplastida | |
Mp6g10930.1 | No alias | component RPS9 of SSU proteome | 0.19 | Archaeplastida | |
Pp3c12_9190V3.1 | No alias | Ribosomal protein S4 | 0.09 | Archaeplastida | |
Pp3c13_19780V3.1 | No alias | Ribosomal protein S4 | 0.14 | Archaeplastida | |
Pp3c27_1920V3.1 | No alias | Ribosomal protein S4 | 0.03 | Archaeplastida | |
Pp3c3_23720V3.1 | No alias | Ribosomal protein S4 | 0.11 | Archaeplastida | |
Pp3c4_15290V3.1 | No alias | Ribosomal protein S4 | 0.18 | Archaeplastida | |
Pp3c6_17680V3.1 | No alias | Ribosomal protein S4 | 0.06 | Archaeplastida | |
Smo157263 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.09 | Archaeplastida | |
Smo74302 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.11 | Archaeplastida | |
Solyc01g010540.3.1 | No alias | component RPS9 of SSU proteome | 0.16 | Archaeplastida | |
Solyc01g010580.3.1 | No alias | component RPS9 of SSU proteome | 0.08 | Archaeplastida | |
Solyc04g005680.4.1 | No alias | component RPS9 of SSU proteome | 0.19 | Archaeplastida | |
Solyc05g007250.3.1 | No alias | component RPS9 of SSU proteome | 0.22 | Archaeplastida | |
Zm00001e010819_P002 | No alias | component RPS9 of SSU proteome | 0.25 | Archaeplastida | |
Zm00001e018345_P001 | No alias | component RPS9 of SSU proteome | 0.15 | Archaeplastida | |
Zm00001e037961_P002 | No alias | component RPS9 of SSU proteome | 0.18 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005622 | intracellular | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
CC | GO:0005840 | ribosome | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006412 | translation | IEP | Neighborhood |
BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No external refs found! |