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  5. GSVIVT01008322001

GSVIVT01008322001


Description : Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0009842 (LandPlants) Phylogenetic Tree(s): OG_05_0009842_tree ,
OG_06_0008072 (SeedPlants) Phylogenetic Tree(s): OG_06_0008072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008322001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.07 Archaeplastida
AT1G73805 No alias Calmodulin binding protein-like 0.06 Archaeplastida
AT4G31000 No alias Calmodulin-binding protein 0.03 Archaeplastida
AT5G26920 CBP60G Cam-binding protein 60-like G 0.11 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.08 Archaeplastida
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01008323001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g04280.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.1 Archaeplastida
LOC_Os09g13890.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g44630.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g36110.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g079040.3.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g113980.3.1 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc03g119250.4.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Solyc07g006830.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g009210.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g036390.2.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e016998_P001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e039693_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 85 373
No external refs found!