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  5. AT1G47800

AT1G47800


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G47800
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G19160 No alias F-box family protein 0.04 Archaeplastida
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G30925 No alias phospholipase Cs 0.04 Archaeplastida
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.03 Archaeplastida
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 Archaeplastida
AT1G46840 No alias F-box family protein 0.07 Archaeplastida
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G52490 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.05 Archaeplastida
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G53815 No alias F-box family protein 0.06 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G61060 No alias F-box family protein 0.08 Archaeplastida
AT1G67130 No alias F-box family protein 0.07 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G23160 No alias F-box family protein 0.08 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.08 Archaeplastida
AT2G40925 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G15670 No alias F-box family protein 0.05 Archaeplastida
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT5G50220 No alias F-box family protein 0.05 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 250 369
IPR001810 F-box_dom 10 52
No external refs found!