Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit
Gene families : OG0005394 (Archaeplastida) Phylogenetic Tree(s): OG0005394_tree ,
OG_05_0006074 (LandPlants) Phylogenetic Tree(s): OG_05_0006074_tree ,
OG_06_0006574 (SeedPlants) Phylogenetic Tree(s): OG_06_0006574_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01008708001 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00149p00026500 | evm_27.TU.AmTr_v1... | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.05 | Archaeplastida | |
AT5G20890 | No alias | TCP-1/cpn60 chaperonin family protein | 0.08 | Archaeplastida | |
Cpa|evm.model.tig00020903.30 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | Archaeplastida | |
Cre09.g416750 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | Archaeplastida | |
LOC_Os03g42220.1 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.11 | Archaeplastida | |
LOC_Os05g48290.3 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.03 | Archaeplastida | |
MA_10434959g0010 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.1 | Archaeplastida | |
Pp3c6_15940V3.1 | No alias | TCP-1/cpn60 chaperonin family protein | 0.07 | Archaeplastida | |
Solyc11g069000.2.1 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.06 | Archaeplastida | |
Zm00001e017228_P001 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.13 | Archaeplastida | |
Zm00001e025595_P002 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.09 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/TCP-1 | 30 | 517 |
No external refs found! |