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  5. GSVIVT01008825001

GSVIVT01008825001


Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC4 component


Gene families : OG0006717 (Archaeplastida) Phylogenetic Tree(s): OG0006717_tree ,
OG_05_0008437 (LandPlants) Phylogenetic Tree(s): OG_05_0008437_tree ,
OG_06_0009966 (SeedPlants) Phylogenetic Tree(s): OG_06_0009966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008825001
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.12 No alias Cell cycle.interphase.DNA... 0.02 Archaeplastida
Pp3c3_37360V3.1 No alias ATPase family associated with various cellular activities (AAA) 0.03 Archaeplastida
Zm00001e039503_P002 No alias component RFC4 of PCNA sliding clamp loader complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 241 323
IPR003959 ATPase_AAA_core 45 172
No external refs found!