AT1G47830

Description : SNARE-like superfamily protein

Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0005986 (LandPlants) Phylogenetic Tree(s): OG_05_0005986_tree ,
OG_06_0007683 (SeedPlants) Phylogenetic Tree(s): OG_06_0007683_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G47830
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
Solyc11g005220.2.1	No alias	small subunit sigma of AP-1 trans-Golgi network cargo...	0.04	Archaeplastida
Zm00001e011050_P001	No alias	small subunit sigma of AP-2 cargo adaptor complex	0.04	Archaeplastida
Zm00001e022339_P001	No alias	small subunit sigma of AP-4 vacuole cargo adaptor complex	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	ISS	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000164	protein phosphatase type 1 complex	IEP	Neighborhood
BP	GO:0002684	positive regulation of immune system process	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008320	protein transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
BP	GO:0009968	negative regulation of signal transduction	IEP	Neighborhood
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010648	negative regulation of cell communication	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Neighborhood
BP	GO:0023057	negative regulation of signaling	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0031349	positive regulation of defense response	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
MF	GO:0042562	hormone binding	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0045089	positive regulation of innate immune response	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0050778	positive regulation of immune response	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
MF	GO:0051740	ethylene binding	IEP	Neighborhood
BP	GO:0052031	modulation by symbiont of host defense response	IEP	Neighborhood
BP	GO:0052033	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	IEP	Neighborhood
BP	GO:0052166	positive regulation by symbiont of host innate immune response	IEP	Neighborhood
BP	GO:0052167	modulation by symbiont of host innate immune response	IEP	Neighborhood
BP	GO:0052169	pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response	IEP	Neighborhood
BP	GO:0052173	response to defenses of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052200	response to host defenses	IEP	Neighborhood
BP	GO:0052255	modulation by organism of defense response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052257	pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052305	positive regulation by organism of innate immune response in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052306	modulation by organism of innate immune response in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052308	pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052509	positive regulation by symbiont of host defense response	IEP	Neighborhood
BP	GO:0052510	positive regulation by organism of defense response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052552	modulation by organism of immune response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052553	modulation by symbiont of host immune response	IEP	Neighborhood
BP	GO:0052555	positive regulation by organism of immune response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052556	positive regulation by symbiont of host immune response	IEP	Neighborhood
BP	GO:0052564	response to immune response of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052572	response to host immune response	IEP	Neighborhood
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0072328	alkene binding	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
BP	GO:0075136	response to host	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Neighborhood
BP	GO:2000012	regulation of auxin polar transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022775	AP_mu_sigma_su	1	141

External Links

No external refs found!

AT1G47830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation