- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009680001 | |
| Cluster | HCCA: Cluster_206 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00106830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | Archaeplastida | |
| AT2G01940 | ATIDD15, SGR5 | C2H2-like zinc finger protein | 0.03 | Archaeplastida | |
| GSVIVT01003119001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | Archaeplastida | |
| GSVIVT01031112001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.11 | Archaeplastida | |
| Gb_21530 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| LOC_Os07g39310.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| MA_10430137g0020 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Pp3c1_16920V3.1 | No alias | C2H2-like zinc finger protein | 0.04 | Archaeplastida | |
| Pp3c1_20230V3.1 | No alias | indeterminate(ID)-domain 2 | 0.03 | Archaeplastida | |
| Pp3c2_20240V3.1 | No alias | indeterminate(ID)-domain 2 | 0.02 | Archaeplastida | |
| Solyc06g062670.3.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Solyc09g074780.3.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e003968_P002 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| Zm00001e014666_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |