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  5. GSVIVT01010061001

GSVIVT01010061001


Description : Cell wall.pectin.rhamnogalacturonan I.synthesis.beta-1,4-galactosyltransferase


Gene families : OG0000886 (Archaeplastida) Phylogenetic Tree(s): OG0000886_tree ,
OG_05_0001473 (LandPlants) Phylogenetic Tree(s): OG_05_0001473_tree ,
OG_06_0001080 (SeedPlants) Phylogenetic Tree(s): OG_06_0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010061001
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT2G33570 No alias Domain of unknown function (DUF23) 0.04 Archaeplastida
AT5G44670 No alias Domain of unknown function (DUF23) 0.02 Archaeplastida
LOC_Os06g41910.1 No alias beta-1,4-galactosyltransferase 0.04 Archaeplastida
MA_10433350g0010 No alias beta-1,4-galactosyltransferase 0.04 Archaeplastida
MA_2788g0010 No alias beta-1,4-galactosyltransferase 0.01 Archaeplastida
MA_401686g0010 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
MA_4509352g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_630451g0010 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
MA_960165g0010 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
MA_99230g0010 No alias beta-1,4-galactosyltransferase 0.02 Archaeplastida
Mp5g04520.1 No alias Galactan beta-1,4-galactosyltransferase GALS1... 0.02 Archaeplastida
Pp3c25_6770V3.1 No alias Domain of unknown function (DUF23) 0.04 Archaeplastida
Pp3c2_7810V3.1 No alias Domain of unknown function (DUF23) 0.05 Archaeplastida
Pp3c3_33280V3.1 No alias Domain of unknown function (DUF23) 0.02 Archaeplastida
Solyc10g005200.3.1 No alias beta-1,4-galactosyltransferase 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 2 164
No external refs found!