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  5. GSVIVT01010243001

GSVIVT01010243001


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component


Gene families : OG0003012 (Archaeplastida) Phylogenetic Tree(s): OG0003012_tree ,
OG_05_0002239 (LandPlants) Phylogenetic Tree(s): OG_05_0002239_tree ,
OG_06_0002393 (SeedPlants) Phylogenetic Tree(s): OG_06_0002393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010243001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Gb_10712 No alias C3H zinc finger transcription factor. regulatory... 0.06 Archaeplastida
LOC_Os04g57600.1 No alias C3H zinc finger transcription factor. regulatory... 0.04 Archaeplastida
MA_17019g0010 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Smo441325 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Solyc01g008170.3.1 No alias C3H zinc finger transcription factor. regulatory... 0.03 Archaeplastida
Solyc04g008550.4.1 No alias C3H zinc finger transcription factor. regulatory... 0.04 Archaeplastida
Zm00001e041908_P001 No alias C3H zinc finger transcription factor. regulatory... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 107 130
No external refs found!