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  5. GSVIVT01010385001

GSVIVT01010385001


Description : Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica


Gene families : OG0002822 (Archaeplastida) Phylogenetic Tree(s): OG0002822_tree ,
OG_05_0001661 (LandPlants) Phylogenetic Tree(s): OG_05_0001661_tree ,
OG_06_0000816 (SeedPlants) Phylogenetic Tree(s): OG_06_0000816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010385001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00067280 evm_27.TU.AmTr_v1... Putative calcium-binding protein CML19 OS=Oryza sativa... 0.04 Archaeplastida
AT1G76650 CML38 calmodulin-like 38 0.06 Archaeplastida
AT5G42380 CML39, CML37 calmodulin like 37 0.06 Archaeplastida
GSVIVT01019035001 No alias Probable calcium-binding protein CML41 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_13855 No alias Probable calcium-binding protein CML41 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g72530.1 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os11g01390.1 No alias Probable calcium-binding protein CML25/26 OS=Oryza... 0.08 Archaeplastida
LOC_Os12g01400.1 No alias Probable calcium-binding protein CML25/26 OS=Oryza... 0.09 Archaeplastida
Solyc02g094000.1.1 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.04 Archaeplastida
Solyc03g005040.1.1 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.04 Archaeplastida
Solyc06g073830.1.1 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.03 Archaeplastida
Solyc11g071740.2.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g071750.2.1 No alias Calcium-binding protein CML37 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g071760.3.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e018580_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028302_P001 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 8 67
IPR002048 EF_hand_dom 107 152
No external refs found!