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Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000968 (SeedPlants) Phylogenetic Tree(s): OG_06_0000968_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01010614001 | |
| Cluster | HCCA: Cluster_212 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G63090 | PP2-A11, AtPP2-A11 | phloem protein 2-A11 | 0.02 | Archaeplastida | |
| LOC_Os01g06500.1 | No alias | Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| LOC_Os12g03740.1 | No alias | F-box protein PP2-B10 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc09g008820.3.1 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | Archaeplastida | |
| Solyc10g083730.2.1 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.04 | Archaeplastida | |
| Zm00001e000116_P001 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | Archaeplastida | |
| Zm00001e016195_P001 | No alias | F-box protein PP2-B1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Zm00001e024648_P001 | No alias | Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0061024 | membrane organization | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Neighborhood |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025886 | PP2-like | 63 | 221 |
| No external refs found! |