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  5. GSVIVT01010906001

GSVIVT01010906001


Description : RNA processing.RNA modification.rRNA/tRNA methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)


Gene families : OG0005359 (Archaeplastida) Phylogenetic Tree(s): OG0005359_tree ,
OG_05_0006627 (LandPlants) Phylogenetic Tree(s): OG_05_0006627_tree ,
OG_06_0006375 (SeedPlants) Phylogenetic Tree(s): OG_06_0006375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010906001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398104 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
LOC_Os02g56020.1 No alias rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) 0.02 Archaeplastida
Mp4g23300.1 No alias rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) 0.06 Archaeplastida
Pp3c12_7620V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Archaeplastida
Smo229976 No alias RNA processing.RNA modification.rRNA/tRNA... 0.06 Archaeplastida
Solyc06g072250.3.1 No alias rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) 0.09 Archaeplastida
Zm00001e016154_P002 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016435 rRNA (guanine) methyltransferase activity IEA Interproscan
BP GO:0070476 rRNA (guanine-N7)-methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 56 158
IPR022238 Bud23 202 289
No external refs found!