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  5. GSVIVT01011097001

GSVIVT01011097001


Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001075 (LandPlants) Phylogenetic Tree(s): OG_05_0001075_tree ,
OG_06_0000936 (SeedPlants) Phylogenetic Tree(s): OG_06_0000936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011097001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.05 Archaeplastida
Gb_11287 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
MA_10186845g0010 No alias CSC1-like protein At3g21620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_67632g0020 No alias CSC1-like protein At3g21620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_78696g0010 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Zm00001e002499_P001 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 209 370
IPR032880 Csc1_N 7 177
IPR003864 RSN1_7TM 381 653
No external refs found!