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Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01011413001 | |
| Cluster | HCCA: Cluster_228 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00261450 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| AMTR_s00010p00261620 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| AMTR_s00038p00027320 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.04 | Archaeplastida | |
| AT1G69600 | ATHB29, ZFHD1, ZHD11 | zinc finger homeodomain 1 | 0.06 | Archaeplastida | |
| AT1G75240 | AtHB33, ZHD5, HB33 | homeobox protein 33 | 0.04 | Archaeplastida | |
| AT2G02540 | ZHD3, HB21, ATHB21, ZFHD4 | homeobox protein 21 | 0.03 | Archaeplastida | |
| AT5G65410 | ZHD1, ZFHD2, HB25, ATHB25 | homeobox protein 25 | 0.06 | Archaeplastida | |
| Gb_37240 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os02g47770.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os04g35500.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| LOC_Os09g24820.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os11g03420.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os11g13930.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| LOC_Os12g03110.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| LOC_Os12g10630.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| MA_453742g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Pp3c22_9600V3.1 | No alias | homeobox protein 31 | 0.02 | Archaeplastida | |
| Pp3c2_21160V3.1 | No alias | homeobox protein 33 | 0.03 | Archaeplastida | |
| Solyc03g116070.1.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Solyc05g051420.2.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e008082_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e009830_P001 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| Zm00001e015590_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e018364_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e021292_P003 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e023331_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005102 | signaling receptor binding | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008083 | growth factor activity | IEP | Neighborhood |
| BP | GO:0008283 | cell proliferation | IEP | Neighborhood |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0030545 | receptor regulator activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0048018 | receptor ligand activity | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 54 | 108 |
| No external refs found! |