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  5. GSVIVT01011872001

GSVIVT01011872001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011872001
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Archaeplastida
AT4G32730 MYB3R-1,... Homeodomain-like protein 0.05 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_26833 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.07 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo90153 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 19 66
IPR001005 SANT/Myb 72 115
No external refs found!